Transcript: LINC01748:29

Basic information

LNCipedia transcript ID: LINC01748:29 
LNCipedia gene ID: LINC01748
Location (hg19): chr1:61053729-61088212
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1110 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001511; NONHSAT003591
Alternative gene names: XLOC_000855; linc-C1orf87-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.0097 non-coding 
CPAT coding probability 2.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01748:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf87-2:2
3.1 lnc-C1orf87-2:2
4.0 lnc-C1orf87-2:2
4.1 lnc-C1orf87-2:2
5.0 lnc-C1orf87-2:2
5.1 LINC01748:13
5.2 LINC01748:29