Transcript: LINC01749:8

Basic information

LNCipedia transcript ID: LINC01749:8 
HGNC Gene Symbol: LINC01749    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1749
Ensembl Gene ID: ENSG00000272259
Ensembl Transcript ID: ENST00000607802
Location (hg19): chr20:61640735-61716423
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3408 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607802.1
Alternative gene names: ENSG00000272259.1; RP11-305P22.9; ENSG00000272259.5; LINC01749


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 69.2332 coding 
CPAT coding probability 61.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01749:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC17A9-4:3
4.0 lnc-SLC17A9-4:3
4.1 lnc-SLC17A9-4:3
5.0 lnc-SLC17A9-4:3
5.1 LINC01749:4
5.2 LINC01749:8