Transcript: LINC01753:5

Basic information

LNCipedia transcript ID: LINC01753:5 
HGNC Gene Symbol: LINC01753    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1753
Ensembl Gene ID: ENSG00000230250
Ensembl Transcript ID: ENST00000458145
Location (hg19): chr1:56381282-56410636
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 631 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458145.1; RP11-90C4.2-001; OTTHUMT00000022601.1; NONHSAT003426
Alternative gene names: ENSG00000230250.1; RP11-90C4.2; OTTHUMG00000008244.1; ENSG00000230250.2; LINC01753


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.4983 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01753:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPAP2B-5:1
4.0 lnc-PPAP2B-5:1
4.1 lnc-PPAP2B-5:1
5.0 lnc-PPAP2B-5:1
5.1 LINC01753:3
5.2 LINC01753:5