Transcript: LINC01762:40

Basic information

LNCipedia transcript ID: LINC01762:40 
LNCipedia gene ID: LINC01762
RefSeq ID: NR_125972
Location (hg19): chr1:116966346-117021448
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 472 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125972; NR_125972.1
Alternative gene names: LOC101929023


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -204.7245 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01762:40 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP1A1OS-2:13
4.0 lnc-ATP1A1OS-2:13
4.1 lnc-ATP1A1OS-2:13
5.0 lnc-ATP1A1OS-2:13
5.1 LINC01762:16
5.2 LINC01762:40