Transcript: LINC01771:15

Basic information

LNCipedia transcript ID: LINC01771:15 
LNCipedia gene ID: LINC01771
Location (hg19): chr1:53793905-53802889
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1275 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000041; NONHSAT003312
Alternative gene names: XLOC_000197; linc-DMRTB1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.996 non-coding 
CPAT coding probability 15.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01771:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPT2-3:1
3.1 lnc-CPT2-7:1
4.0 lnc-CPT2-7:1
4.1 lnc-CPT2-7:1
5.0 lnc-CPT2-7:1
5.1 LINC01771:7
5.2 LINC01771:15