Transcript: LINC01780:19

Basic information

LNCipedia transcript ID: LINC01780:19 
LNCipedia gene ID: LINC01780
Location (hg19): chr1:119871331-119904997
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 456 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT005556
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.163 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01780:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAO2-1:4
4.0 lnc-HAO2-1:4
4.1 lnc-HAO2-1:4
5.0 lnc-HAO2-1:4
5.1 LINC01780:10
5.2 LINC01780:19