Transcript: LINC01786:5

Basic information

LNCipedia transcript ID: LINC01786:5 
LNCipedia gene ID: LINC01786
Location (hg19): chr1:1210339-1214764
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 558 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000799; NONHSAT000269
Alternative gene names: XLOC_000015; linc-SCNN1D


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 45.9308 non-coding 
CPAT coding probability 26.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01786:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SCNN1D-1:1
3.1 lnc-SCNN1D-1:1
4.0 lnc-SCNN1D-1:1
4.1 lnc-SCNN1D-1:1
5.0 lnc-SCNN1D-1:1
5.1 LINC01786:2
5.2 LINC01786:5