Transcript: LINC01786:7

Basic information

LNCipedia transcript ID: LINC01786:7 
HGNC Gene Symbol: LINC01786    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1786
Ensembl Gene ID: ENSG00000230415
Ensembl Transcript ID: ENST00000453732
Location (hg19): chr1:1210617-1214773
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 389 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000136; ENST00000453732.1; RP5-902P8.10-002; OTTHUMT00000006364.2; NONHSAT000271
Alternative gene names: XLOC_000015; linc-SCNN1D; ENSG00000230415.1; RP5-902P8.10; OTTHUMG00000002234.2; LINC01786


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 21.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01786:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SCNN1D-1:3
3.1 lnc-SCNN1D-1:3
4.0 lnc-SCNN1D-1:3
4.1 lnc-SCNN1D-1:3
5.0 lnc-SCNN1D-1:3
5.1 LINC01786:4
5.2 LINC01786:7