Transcript: LINC01811:19

Basic information

LNCipedia transcript ID: LINC01811:19 
LNCipedia gene ID: LINC01811
Location (hg19): chr3:34200874-34402551
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 592 bp
Exons: 6
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00005511; ENST00000415991; ENST00000415991.1; AC018359.1-002; OTTHUMT00000341539.1; NONHSAT088950
Alternative gene names: XLOC_002612; linc-ARPP21-1; ENSG00000226320; AC018359.1; ENSG00000226320.1; OTTHUMG00000155767.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.0048 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD6IP-2:3
3.1 lnc-PDCD6IP-2:3
4.0 lnc-PDCD6IP-2:3
4.1 lnc-PDCD6IP-2:3
5.0 lnc-PDCD6IP-2:3
5.1 LINC01811:4
5.2 LINC01811:19