Transcript: LINC01811:24

Basic information

LNCipedia transcript ID: LINC01811:24 
LNCipedia gene ID: LINC01811
Location (hg19): chr3:34242415-34310187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 419 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005983; NONHSAT088953
Alternative gene names: XLOC_002613; linc-ARPP21-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -412.5581 non-coding 
CPAT coding probability 4.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD6IP-1:1
3.1 lnc-PDCD6IP-1:1
4.0 lnc-PDCD6IP-2:13
4.1 lnc-PDCD6IP-2:13
5.0 lnc-PDCD6IP-2:13
5.1 LINC01811:9
5.2 LINC01811:24