Transcript: LINC01811:25

Basic information

LNCipedia transcript ID: LINC01811:25 
LNCipedia gene ID: LINC01811
Ensembl Gene ID: ENSG00000236452
Ensembl Transcript ID: ENST00000455974
Location (hg19): chr3:34244736-34310303
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005512; ENST00000455974; ENST00000455974.1; AC123023.1-001; OTTHUMT00000341535.1; NONHSAT088954
Alternative gene names: XLOC_002613; linc-ARPP21-2; ENSG00000236452; AC123023.1; ENSG00000236452.1; OTTHUMG00000155764.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -288.3637 non-coding 
CPAT coding probability 4.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD6IP-1:2
3.1 lnc-PDCD6IP-1:2
4.0 lnc-PDCD6IP-2:14
4.1 lnc-PDCD6IP-2:14
5.0 lnc-PDCD6IP-2:14
5.1 LINC01811:10
5.2 LINC01811:25