Transcript: LINC01811:28

Basic information

LNCipedia transcript ID: LINC01811:28 
LNCipedia gene ID: LINC01811
Location (hg19): chr3:34401795-34476954
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 547 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005984; NONHSAT088959
Alternative gene names: XLOC_002612; linc-ARPP21-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.0048 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD6IP-2:7
3.1 lnc-PDCD6IP-2:7
4.0 lnc-PDCD6IP-2:7
4.1 lnc-PDCD6IP-2:7
5.0 lnc-PDCD6IP-2:7
5.1 LINC01811:13
5.2 LINC01811:28