Transcript: LINC01816:13

Basic information

LNCipedia transcript ID: LINC01816:13 
LNCipedia gene ID: LINC01816
Location (hg19): chr2:70349946-70369889
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1701 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231327.1|MICT00000191364.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.939 non-coding 
CPAT coding probability 18.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01816:13 no no no no

Available literature

  1. Tian (2017), Differentially Expressed lncRNAs in Gastric Cancer Patients: A Potential Biomarker for Gastric Cancer Prognosis., J Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C2orf42-1:7
5.0 lnc-C2orf42-1:7
5.1 LINC01816:2
5.2 LINC01816:13