Transcript: LINC01820:13

Basic information

LNCipedia transcript ID: LINC01820:13 
LNCipedia gene ID: LINC01820
Location (hg19): chr2:46559655-46656225
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 60234 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228100.1|ENCT00000241600.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 195.0632 coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01820:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V1E2-1:5
5.0 lnc-ATP6V1E2-1:5
5.1 LINC01820:2
5.2 LINC01820:13