Transcript: LINC01822:4

Basic information

LNCipedia transcript ID: LINC01822:4 
LNCipedia gene ID: LINC01822
RefSeq ID: NR_038837
Location (hg19): chr2:21910306-21933524
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2127 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT069503; NR_038837; NR_038837.1
Alternative gene names: LOC645949


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.9128 non-coding 
CPAT coding probability 14.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01822:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APOB-6:2
4.0 lnc-APOB-6:2
4.1 lnc-APOB-6:2
5.0 lnc-APOB-6:2
5.1 LINC01822:2
5.2 LINC01822:4