Transcript: LINC01831:4

Basic information

LNCipedia transcript ID: LINC01831:4 
LNCipedia gene ID: LINC01831
RefSeq ID: NR_135589
Location (hg19): chr2:105028610-105030489
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 591 bp
Exons: 2
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT072910; NR_135589.1
Alternative gene names: LOC101927331


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -358.7732 non-coding 
CPAT coding probability 5.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01831:4 no no no no

Available literature

  1. Zhu (2014), The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBRAP1-10:2
4.0 lnc-TGFBRAP1-10:2
4.1 lnc-TGFBRAP1-10:2
5.0 lnc-TGFBRAP1-10:2
5.1 LINC01831:2
5.2 LINC01831:4