Transcript: LINC01833:29

Basic information

LNCipedia transcript ID: LINC01833:29 
LNCipedia gene ID: LINC01833
Location (hg19): chr2:45158263-45166345
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7357 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT070434
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.4157 non-coding 
CPAT coding probability 35.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01833:29 no no no no

Available literature

  1. Chen (2016), Detection and Analysis of Wnt Pathway Related lncRNAs Expression Profile in Lung Adenocarcinoma., Pathol. Oncol. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIX2-3:11
4.0 lnc-SIX2-3:11
4.1 lnc-SIX2-3:11
5.0 lnc-SIX2-3:11
5.1 LINC01833:8
5.2 LINC01833:29