Transcript: LINC01837:35

Basic information

LNCipedia transcript ID: LINC01837:35 
HGNC Gene Symbol: LINC01837    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1837
Ensembl Gene ID: ENSG00000267489
Ensembl Transcript ID: ENST00000593211
Location (hg19): chr19:32413790-32436304
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT064155; ENST00000593211.1
Alternative gene names: ENSG00000267094.1; CTC-360P9.5; ENSG00000267489.3; CTC-360P9.4; LINC01837


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.3964 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01837:35 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSHZ3-3:4
4.0 lnc-TSHZ3-3:4
4.1 lnc-TSHZ3-3:4
5.0 lnc-TSHZ3-3:4
5.1 LINC01837:17
5.2 LINC01837:35