Transcript: LINC01855:11

Basic information

LNCipedia transcript ID: LINC01855:11 
LNCipedia gene ID: LINC01855
Location (hg19): chr19:16176617-16177093
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00027491
Alternative gene names: XLOC_012984; linc-TPM4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.941 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01855:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPM4-1:2
3.1 lnc-TPM4-1:2
4.0 lnc-TPM4-1:2
4.1 lnc-TPM4-1:2
5.0 lnc-TPM4-1:2
5.1 LINC01855:6
5.2 LINC01855:11