Transcript: LINC01864:5

Basic information

LNCipedia transcript ID: LINC01864:5 
LNCipedia gene ID: LINC01864
Location (hg19): chr19:56578050-56590164
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1658 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000505773; TCONS_00026836
Alternative gene names: ENSG00000248386; XLOC_013163; linc-ZNF444-2; AC024580.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.1676 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01864:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NLRP5-1:1
3.1 lnc-NLRP5-1:1
4.0 lnc-NLRP5-1:1
4.1 lnc-NLRP5-1:1
5.0 lnc-NLRP5-1:1
5.1 LINC01864:2
5.2 LINC01864:5