Transcript: LINC01869:27

Basic information

LNCipedia transcript ID: LINC01869:27 
LNCipedia gene ID: LINC01869
Location (hg19): chr19:51319381-51322108
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1036 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027597; NONHSAT067372
Alternative gene names: XLOC_013119; linc-KLK3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.8237 non-coding 
CPAT coding probability 25.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01869:27 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC010325.1-1:3
3.1 lnc-AC010325.1-1:3
4.0 lnc-AC010325.1-1:3
4.1 lnc-AC010325.1-1:3
5.0 lnc-AC010325.1-1:3
5.1 LINC01869:12
5.2 LINC01869:27