Transcript: LINC01869:28

Basic information

LNCipedia transcript ID: LINC01869:28 
LNCipedia gene ID: LINC01869
Location (hg19): chr19:51320937-51322133
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 935 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00026795
Alternative gene names: XLOC_013119; linc-KLK3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.3323 non-coding 
CPAT coding probability 25.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01869:28 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC010325.1-1:4
3.1 lnc-AC010325.1-1:4
4.0 lnc-AC010325.1-1:4
4.1 lnc-AC010325.1-1:4
5.0 lnc-AC010325.1-1:4
5.1 LINC01869:13
5.2 LINC01869:28