Transcript: LINC01889:4

Basic information

LNCipedia transcript ID: LINC01889:4 
LNCipedia gene ID: LINC01889
Location (hg19): chr2:126468545-126523419
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 670 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074121; FPKM1_group_17139_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -227.3564 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01889:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNTNAP5-3:2
4.0 lnc-CNTNAP5-3:2
4.1 lnc-CNTNAP5-3:2
5.0 lnc-CNTNAP5-3:2
5.1 LINC01889:2
5.2 LINC01889:4