Transcript: LINC01911:3

Basic information

LNCipedia transcript ID: LINC01911:3 
HGNC Gene Symbol: LINC01911    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1911
Ensembl Gene ID: ENSG00000231040
Ensembl Transcript ID: ENST00000450667
Location (hg19): chr2:147595317-147607878
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 806 bp
Exons: 6
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00003027; ENST00000450667; ENST00000450667.1; AC103881.1-002; OTTHUMT00000332185.1; NONHSAT074849
Alternative gene names: XLOC_001699; linc-ACVR2A-2; ENSG00000231040; AC103881.1; ENSG00000231040.1; OTTHUMG00000153708.1; LINC01911


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.413 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01911:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACVR2A-2:1
3.1 lnc-ACVR2A-2:1
4.0 lnc-ACVR2A-2:1
4.1 lnc-ACVR2A-2:1
5.0 lnc-ACVR2A-2:1
5.1 LINC01911:2
5.2 LINC01911:3