Transcript: LINC01923:11

Basic information

LNCipedia transcript ID: LINC01923:11 
HGNC Gene Symbol: LINC01923    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1923
Ensembl Gene ID: ENSG00000236653
Ensembl Transcript ID: ENST00000456248
Location (hg19): chr2:199164087-199239273
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2528 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00002773; ENST00000456248; ENST00000456248.1; AC005235.1-001; OTTHUMT00000335344.1; NONHSAT076238
Alternative gene names: XLOC_002449; linc-BOLL-4; ENSG00000236653; AC005235.1; ENSG00000236653.1; OTTHUMG00000154465.2; ENSG00000236653.2; LINC01923


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.3644 non-coding 
CPAT coding probability 4.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01923:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BOLL-3:2
3.1 lnc-BOLL-3:2
4.0 lnc-BOLL-3:2
4.1 lnc-BOLL-3:2
5.0 lnc-BOLL-3:2
5.1 LINC01923:5
5.2 LINC01923:11