Transcript: LINC01923:13

Basic information

LNCipedia transcript ID: LINC01923:13 
HGNC Gene Symbol: LINC01923    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1923
Ensembl Gene ID: ENSG00000236653
Ensembl Transcript ID: ENST00000451266
Location (hg19): chr2:199166132-199179438
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 564 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00003477; ENST00000451266; ENST00000451266.1; AC005235.1-002; OTTHUMT00000335345.1; NONHSAT076239
Alternative gene names: XLOC_002449; linc-BOLL-4; ENSG00000236653; AC005235.1; ENSG00000236653.1; OTTHUMG00000154465.2; ENSG00000236653.2; LINC01923


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.0029 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01923:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BOLL-3:3
3.1 lnc-BOLL-3:3
4.0 lnc-BOLL-3:3
4.1 lnc-BOLL-3:3
5.0 lnc-BOLL-3:3
5.1 LINC01923:7
5.2 LINC01923:13