Transcript: LINC01923:9

Basic information

LNCipedia transcript ID: LINC01923:9 
LNCipedia gene ID: LINC01923
Location (hg19): chr2:199239200-199239821
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 357 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: TCONS_00003478; ENST00000443261; ENST00000443261.1; AC005235.1-003; OTTHUMT00000335361.1; NONHSAT076241
Alternative gene names: XLOC_002449; linc-BOLL-4; ENSG00000236653; AC005235.1; ENSG00000236653.1; OTTHUMG00000154465.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -227.8645 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01923:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BOLL-3:1
3.1 lnc-BOLL-3:1
4.0 lnc-BOLL-3:1
4.1 lnc-BOLL-3:1
5.0 lnc-BOLL-3:1
5.1 LINC01923:3
5.2 LINC01923:9