Transcript: LINC01934:4

Basic information

LNCipedia transcript ID: LINC01934:4 
HGNC Gene Symbol: LINC01934    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1934
Ensembl Gene ID: ENSG00000234663
Ensembl Transcript ID: ENST00000642559
Location (hg19): chr2:181983314-182218963
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1332 bp
Exons: 10
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642559.1
Alternative gene names: ENSG00000234663.6; LINC01934


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.148 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01934:4 no no no no

Available literature

  1. Plaza-Izurieta (2015), Expression analysis in intestinal mucosa reveals complex relations among genes under the association peaks in celiac disease., Eur. J. Hum. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01934:4
5.1 LINC01934:4
5.2 LINC01934:4