Transcript: LINC01936:19

Basic information

LNCipedia transcript ID: LINC01936:19 
LNCipedia gene ID: LINC01936
RefSeq ID: NR_122048
Location (hg19): chr2:30569512-30573024
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 692 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122048; NR_122048.1
Alternative gene names: LOC285043


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -200.3019 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01936:19 no no no no

Available literature

  1. Li (2015), Expression of long non-coding RNA DLX6-AS1 in lung adenocarcinoma., Cancer Cell Int.
  2. Li (2015), Study on expression of lncRNA RGMB-AS1 and repulsive guidance molecule b in non-small cell lung cancer., Diagn Pathol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LBH-2:11
4.0 lnc-LBH-2:11
4.1 lnc-LBH-2:11
5.0 lnc-LBH-2:11
5.1 LINC01936:5
5.2 LINC01936:19