Transcript: LINC01955:3

Basic information

LNCipedia transcript ID: LINC01955:3 
HGNC Gene Symbol: LINC01955    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1955
Ensembl Gene ID: ENSG00000281477
Ensembl Transcript ID: ENST00000626392
Location (hg19): chr2:87476218-87480873
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 792 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626392.1
Alternative gene names: ENSG00000281477.1; RP11-223J6.2; LINC01955


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.3434 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01955:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PLGLB1-8:1
4.1 lnc-PLGLB1-8:1
5.0 lnc-PLGLB1-8:1
5.1 LINC01955:2
5.2 LINC01955:3