Transcript: LINC01958:3

Basic information

LNCipedia transcript ID: LINC01958:3 
HGNC Gene Symbol: LINC01958    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1958
Ensembl Gene ID: ENSG00000283436
Ensembl Transcript ID: ENST00000637749
Location (hg19): chr2:157511736-157552171
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1941 bp
Exons: 5
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637749.1
Alternative gene names: ENSG00000283436.1; RP11-366G5.1; LINC01958


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.9837 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01958:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPD2-8:1
5.0 lnc-GPD2-8:1
5.1 LINC01958:2
5.2 LINC01958:3