Transcript: LINC01961:13

Basic information

LNCipedia transcript ID: LINC01961:13 
LNCipedia gene ID: LINC01961
Location (hg19): chr2:114269931-114272888
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1592 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00002982; NONHSAT073787
Alternative gene names: XLOC_001631; linc-RABL2A-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.6252 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01961:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXD4L1-1:4
3.1 lnc-FOXD4L1-1:4
4.0 lnc-FOXD4L1-1:4
4.1 lnc-FOXD4L1-1:4
5.0 lnc-FOXD4L1-1:4
5.1 LINC01961:6
5.2 LINC01961:13