Transcript: LINC01962:11

Basic information

LNCipedia transcript ID: LINC01962:11 
LNCipedia gene ID: LINC01962
Location (hg19): chr5:180615433-180615961
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 529 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr5_11102_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.4432 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01962:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM7-4:1
4.0 lnc-TRIM7-4:1
4.1 lnc-TRIM7-2:5
5.0 lnc-TRIM7-2:5
5.1 LINC01962:6
5.2 LINC01962:11