Transcript: LINC01978:18

Basic information

LNCipedia transcript ID: LINC01978:18 
LNCipedia gene ID: LINC01978
Location (hg19): chr17:77893173-77893668
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262188.1|HBMT00000612380.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -90.2406 non-coding 
CPAT coding probability 1.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01978:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCDC40-2:7
5.0 lnc-CCDC40-2:7
5.1 LINC01978:7
5.2 LINC01978:18