Transcript: LINC01980:2

Basic information

LNCipedia transcript ID: LINC01980:2 
HGNC Gene Symbol: LINC01980    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1980
Ensembl Gene ID: ENSG00000225548
Ensembl Transcript ID: ENST00000647336
Location (hg19): chr3:27839054-27973070
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1819 bp
Exons: 8
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000647336.1
Alternative gene names: ENSG00000225548.6; LINC01980


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.0377 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01980:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01980:2
5.1 LINC01980:2
5.2 LINC01980:2