Transcript: LINC01986:5

Basic information

LNCipedia transcript ID: LINC01986:5 
LNCipedia gene ID: LINC01986
Location (hg19): chr3:62254-66367
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 748 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005935; NONHSAT087551
Alternative gene names: XLOC_002562; linc-CHL1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.1217 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01986:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHL1-2:1
3.1 lnc-CHL1-2:1
4.0 lnc-CHL1-2:1
4.1 lnc-CHL1-2:1
5.0 lnc-CHL1-2:1
5.1 LINC01986:3
5.2 LINC01986:5