Transcript: LINC01988:11

Basic information

LNCipedia transcript ID: LINC01988:11 
LNCipedia gene ID: LINC01988
Location (hg19): chr3:44465602-44470995
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 825 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006820; NONHSAT089315
Alternative gene names: XLOC_002630; linc-ZNF167


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.2719 non-coding 
CPAT coding probability 39.15% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01988:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C3orf23-1:2
3.1 lnc-C3orf23-1:1
4.0 lnc-C3orf23-1:1
4.1 lnc-C3orf23-1:1
5.0 lnc-C3orf23-1:1
5.1 LINC01988:3
5.2 LINC01988:11