Transcript: LINC02010:7

Basic information

LNCipedia transcript ID: LINC02010:7 
HGNC Gene Symbol: LINC02010    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2010
Ensembl Gene ID: ENSG00000242671
Ensembl Transcript ID: ENST00000471638
Location (hg19): chr3:146639750-146643005
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1829 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005611; ENST00000471638; ENST00000471638.1; RP11-232M24.1-001; OTTHUMT00000355495.1; NONHSAT092570
Alternative gene names: XLOC_002856; linc-ZIC1-1; ENSG00000242671; RP11-232M24.1; ENSG00000242671.1; OTTHUMG00000159455.1; LINC02010


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.5968 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02010:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZIC1-3:2
3.1 lnc-ZIC1-4:2
4.0 lnc-ZIC1-4:2
4.1 lnc-ZIC1-4:2
5.0 lnc-ZIC1-4:2
5.1 LINC02010:5
5.2 LINC02010:7