Transcript: LINC02013:3

Basic information

LNCipedia transcript ID: LINC02013:3 
HGNC Gene Symbol: LINC02013    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2013
Ensembl Gene ID: ENSG00000228730
Ensembl Transcript ID: ENST00000438156
Location (hg19): chr3:190415712-190416637
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 526 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005914; ENST00000438156; ENST00000438156.1; RP11-95L3.2-001; OTTHUMT00000343362.1; NONHSAT093956
Alternative gene names: XLOC_003370; linc-TMEM207-2; ENSG00000228730; RP11-95L3.2; ENSG00000228730.1; OTTHUMG00000156193.1; LINC02013


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -271.725 non-coding 
CPAT coding probability 7.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02013:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GMNC-3:1
3.1 lnc-GMNC-3:1
4.0 lnc-GMNC-3:1
4.1 lnc-GMNC-3:1
5.0 lnc-GMNC-3:1
5.1 LINC02013:2
5.2 LINC02013:3