Transcript: LINC02027:22

Basic information

LNCipedia transcript ID: LINC02027:22 
LNCipedia gene ID: LINC02027
Location (hg19): chr3:81043034-81146631
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2513 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006107; NONHSAT090606
Alternative gene names: XLOC_002717; linc-CADM2-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.702 non-coding 
CPAT coding probability 3.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02027:22 no no no no

Available literature

  1. Zhang (2017), Decreased expression of long non-coding RNA LOC728290 in human hepatocellular carcinoma., Oncol Lett


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ROBO2-5:4
3.1 lnc-ROBO2-5:4
4.0 lnc-ROBO2-5:4
4.1 lnc-ROBO2-5:4
5.0 lnc-ROBO2-5:4
5.1 LINC02027:11
5.2 LINC02027:22