Transcript: LINC02036:10

Basic information

LNCipedia transcript ID: LINC02036:10 
HGNC Gene Symbol: LINC02036    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2036
Ensembl Gene ID: ENSG00000225742
Ensembl Transcript ID: ENST00000432908
Location (hg19): chr3:193921269-193924096
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 408 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005922; ENST00000432908; ENST00000432908.1; RP11-513G11.4-002; OTTHUMT00000342635.1; NONHSAT094069
Alternative gene names: XLOC_003384; linc-ATP13A4-7; ENSG00000225742; RP11-513G11.4; ENSG00000225742.1; OTTHUMG00000155985.1; ENSG00000225742.5; LINC02036


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -314.2908 non-coding 
CPAT coding probability 2.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02036:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPN2-2:3
3.1 lnc-CPN2-2:3
4.0 lnc-CPN2-2:3
4.1 lnc-CPN2-2:3
5.0 lnc-CPN2-2:3
5.1 LINC02036:4
5.2 LINC02036:10