Transcript: LINC02039:11

Basic information

LNCipedia transcript ID: LINC02039:11 
LNCipedia gene ID: LINC02039
Location (hg19): chr5:125526879-125530398
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1189 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00010082
Alternative gene names: XLOC_004539; linc-GRAMD3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.7632 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02039:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRAMD3-1:5
3.1 lnc-GRAMD3-1:5
4.0 lnc-GRAMD3-1:5
4.1 lnc-GRAMD3-1:5
5.0 lnc-GRAMD3-1:5
5.1 LINC02039:6
5.2 LINC02039:11