Transcript: LINC02039:8

Basic information

LNCipedia transcript ID: LINC02039:8 
LNCipedia gene ID: LINC02039
Location (hg19): chr5:125515329-125531403
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 843 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010081; NONHSAT103568
Alternative gene names: XLOC_004539; linc-GRAMD3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -200.036 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02039:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRAMD3-1:2
3.1 lnc-GRAMD3-1:2
4.0 lnc-GRAMD3-1:2
4.1 lnc-GRAMD3-1:2
5.0 lnc-GRAMD3-1:2
5.1 LINC02039:3
5.2 LINC02039:8