Transcript: LINC02050:22

Basic information

LNCipedia transcript ID: LINC02050:22 
LNCipedia gene ID: LINC02050
Location (hg19): chr3:80819921-80838505
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 477 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006105; NONHSAT090600
Alternative gene names: XLOC_002716; linc-CADM2-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.9856 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02050:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ROBO2-4:4
3.1 lnc-ROBO2-4:4
4.0 lnc-ROBO2-4:4
4.1 lnc-ROBO2-4:4
5.0 lnc-ROBO2-4:4
5.1 LINC02050:10
5.2 LINC02050:22