Transcript: LINC02055:27

Basic information

LNCipedia transcript ID: LINC02055:27 
LNCipedia gene ID: LINC02055
Location (hg19): chr8:137802076-137997178
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1424 bp
Exons: 8
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT129317; FPKM1_group_32392_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.6496 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02055:27 no no no no

Available literature

  1. Xiao (2016), The significance of low levels of LINC RP1130-1 expression in human hepatocellular carcinoma., Biosci Trends


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KHDRBS3-9:11
4.0 lnc-KHDRBS3-9:11
4.1 lnc-KHDRBS3-9:11
5.0 lnc-KHDRBS3-9:11
5.1 LINC02055:13
5.2 LINC02055:27