Transcript: LINC02056:26

Basic information

LNCipedia transcript ID: LINC02056:26 
LNCipedia gene ID: LINC02056
Ensembl Gene ID: ENSG00000249085
Ensembl Transcript ID: ENST00000507957
Location (hg19): chr5:72090232-72112392
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 493 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000507957.1; CTD-2631K10.1-001; OTTHUMT00000369153.1
Alternative gene names: ENSG00000249085.1; CTD-2631K10.1; OTTHUMG00000162494.1; AC035140.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.965 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02056:26 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF366-5:1
4.0 lnc-ZNF366-5:1
4.1 lnc-ZNF366-3:17
5.0 lnc-ZNF366-3:17
5.1 LINC02056:3
5.2 LINC02056:26