Transcript: LINC02056:34

Basic information

LNCipedia transcript ID: LINC02056:34 
LNCipedia gene ID: LINC02056
Ensembl Gene ID: ENSG00000251613
Ensembl Transcript ID: ENST00000508217
Location (hg19): chr5:71986376-72058554
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000508217; ENST00000508217.2; CTC-347C20.1-003; OTTHUMT00000373659.2; NONHSAT102075
Alternative gene names: ENSG00000251613; CTC-347C20.1; ENSG00000251613.3; OTTHUMG00000163316.4; AC063979.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.0279 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02056:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF366-2:1
3.1 lnc-ZNF366-3:1
4.0 lnc-ZNF366-3:1
4.1 lnc-ZNF366-3:1
5.0 lnc-ZNF366-3:1
5.1 LINC02056:11
5.2 LINC02056:34