Transcript: LINC02059:10

Basic information

LNCipedia transcript ID: LINC02059:10 
HGNC Gene Symbol: LINC02059    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2059
Ensembl Gene ID: ENSG00000250544
Ensembl Transcript ID: ENST00000503843
Location (hg19): chr5:86042748-86045395
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 452 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009439; ENST00000503843; ENST00000503843.1; CTC-493L21.1-002; OTTHUMT00000369752.1; NONHSAT102577
Alternative gene names: XLOC_004452; linc-RASA1-3; ENSG00000250544; CTC-493L21.1; ENSG00000250544.1; OTTHUMG00000162607.1; LINC02059


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -226.8769 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02059:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COX7C-2:3
3.1 lnc-COX7C-2:3
4.0 lnc-COX7C-2:3
4.1 lnc-COX7C-2:3
5.0 lnc-COX7C-2:3
5.1 LINC02059:5
5.2 LINC02059:10