Transcript: LINC02063:3

Basic information

LNCipedia transcript ID: LINC02063:3 
HGNC Gene Symbol: LINC02063    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2063
Ensembl Gene ID: ENSG00000250921
Ensembl Transcript ID: ENST00000503415
Location (hg19): chr5:4135795-4143761
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009332; ENST00000503415; ENST00000503415.1; CTD-2008N3.1-001; OTTHUMT00000365549.1; NONHSAT100133
Alternative gene names: XLOC_004264; linc-ADAMTS16-6; ENSG00000250921; CTD-2008N3.1; ENSG00000250921.1; OTTHUMG00000161635.1; LINC02063


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.3308 non-coding 
CPAT coding probability 6.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02063:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2012M11.2.1-1:1
3.1 lnc-CTD-2012M11.2.1-1:1
4.0 lnc-CTD-2012M11.2.1-1:1
4.1 lnc-CTD-2012M11.2.1-1:1
5.0 lnc-CTD-2012M11.2.1-1:1
5.1 LINC02063:2
5.2 LINC02063:3