Transcript: LINC02068:16

Basic information

LNCipedia transcript ID: LINC02068:16 
HGNC Gene Symbol: LINC02068    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2068
Ensembl Gene ID: ENSG00000223387
Ensembl Transcript ID: ENST00000418839
Location (hg19): chr3:172308503-172312460
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3212 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418839; ENST00000418839.2; RP11-408H1.3-001; OTTHUMT00000346975.2; NONHSAT093253
Alternative gene names: ENSG00000223387; RP11-408H1.3; ENSG00000223387.2; OTTHUMG00000156985.3; ENSG00000223387.6; LINC02068


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.6707 non-coding 
CPAT coding probability 6.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02068:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NCEH1-1:4
3.1 lnc-NCEH1-1:4
4.0 lnc-NCEH1-1:4
4.1 lnc-NCEH1-1:4
5.0 lnc-NCEH1-1:4
5.1 LINC02068:8
5.2 LINC02068:16